Running workflows¶
To run a workflow created with nlppln, you need to use a CWL runner. The default CWL runner cwltool is installed when you install nlppln. To run a tool:
cwltool <workflow> <inputs>
The scriptcwl documentation contains some tips and tricks for working with CWL files.
Windows¶
To run a workflow created with nlppln on Windows, use the nlppln Docker container:
cwltool --default-container nlppln:nlppln <workflow> <inputs>
Also, if you have to refer to file paths with spaces in them, use the
--relax-path-checks
option.
For more details about CWL on Windows, see the Windows documentation.